Pain Phenomics
QTL Mapping
Transgenic Studies
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Mice, like humans, show robust individual differences in their sensitivity to pain, pain inhibition, and susceptibility to chronic pain development after injury. Like all biological traits, some proportion of this variability is due to inherited genetic factors ("nature"), some proportion is due to environmental factors ("nurture"), and some proportion is due to the interaction of the two. The identification of the genes responsible for variability in pain traits is accomplished by quantitative trait locus (QTL) mapping followed by some combination of candidate gene testing and/or positional cloning. It's important to note that these "pain variability genes" represent a subset of all "pain genes," defined simply as genes coding for proteins of relevance to pain. The latter type of pain gene can be identified via conventional techniques, transgenic knockout experiments, and microarray gene expression profiling. A compilation of pain genes as defined by transgenic knockout experiments is provided in the Resources (Pain Genes Db) section of this website.


Using these techniques, the Pain Genetics Lab and collaborators have provided evidence for the following genomic regions (and genes) associated with variability in pain.


TraitGenomic LocationSex Specificity?Likely Gene
Hot Plate TestChr. 4, ≈70 cMMale>Female Oprd1 (delta-opioid receptor)
Formalin TestChr. 9, ≈60 cMNoAtp1b3 (beta-3 subunit of the sodium-potassium pump)
 Chr. 10, ≈70 cMNoAvpr1a (vasopressin receptor 1A)
Paw-Withdrawal TestChr. 7, ≈55 cMFemale>MaleCalca (CGRP)
Morphine AnalgesiaChr. 1, ≈10 cMFemale Only???
 Chr. 9, ≈20 cMFemale Only???
 Chr. 9, ≈40 cMNoHtr1b (5-HT receptor,1B)
 Chr. 10, ≈10 cMMale>FemaleOprm (mu-opioid receptor)
U50,488 (kappa-opioid) AnalgesiaChr. 8, ≈65 cMFemale OnlyMc1r (melanocortin-1 receptor)



The Pain Genetics Lab continues to work towards the identification of genomic regions associated with variability in pain-related traits, and in the identification of the responsible genes within these regions. Current projects include: mechanical allodynia, pregabalin analgesia, epibatidine analgesia, and chloroquine-induced itch. In addition to our QTL mapping efforts, much can be learned about pain by examining genetic correlations among pain-related traits. We have tested a common set of 12 inbred mouse strains (all genetically identical "clones" of each other) for many, many types of pain, analgesia, and related traits (including tolerance, dependence, itch). Traits in which the same strains are sensitive and resistant are traits in which variability is mediated by common genes, and thus common physiology. We have used genetic correlation analysis to define primary or fundamental types of pain, to infer the existence of "master" analgesia genes, and to demonstrate that the potency of analgesics in mice is dependent on the type of pain being inhibited.